- Spangled
- Speed prod. by Alan Moulder, Billy Corgan & Flood
- Speed Kills prod. by Billy Corgan & Jimmy Chamberlin
- Speed Kills (Acoustic Demo) prod. by Billy Corgan
- Spellbinding prod. by Billy Corgan
- Spiteface prod. by Billy Corgan & Quentin Sanbria
- Springtimes prod. by Billy Corgan
- Starla [10:59]
- Starla (2011 Mix) (Unreleased)
- Starrcraft prod. by Billy Corgan
- Stars Fall In
- Star Song (Dat Mix/Vocal Rough) prod. by Alan Moulder, Billy Corgan, D'arcy Wretzky, Flood & James Iha
- Starz prod. by Billy Corgan, Jimmy Chamberlin & Roy Thomas Baker
- Stellar prod. by Billy Corgan & Jimmy Chamberlin
- STP
- Stray Cat Blues
- Suicide Kiss (Alternate Version of Geek U.S.A.)
- Summer prod. by James Iha
- Sun prod. by Billy Corgan & Paul Chabala