- Sensory Overload prod. by Big Dick
- Shattered Faith prod. by Brett Gurewitz & Greg Graffin
- Skyscraper prod. by Bobby Schayer, Brett Gurewitz, Greg Graffin, Greg Hetson & Jay Bentley
- Slumber prod. by Andy Wallace
- Social Suicide prod. by Brett Gurewitz & Greg Graffin
- Sometimes I Feel Like
- Sorrow prod. by Brett Gurewitz & Greg Graffin
- Stealth prod. by Bobby Schayer, Brett Gurewitz, Greg Graffin, Greg Hetson & Jay Bentley
- Stranger Than Fiction prod. by Andy Wallace
- Struck a Nerve (Ft. Johnette Napolitano) prod. by Bobby Schayer, Brett Gurewitz, Greg Graffin, Greg Hetson & Jay Bentley
- Suffer
- Supersonic prod. by Brett Gurewitz & Greg Graffin
- Television (Ft. Tim Timebomb) prod. by Andy Wallace
- Ten in 2010 prod. by Ric Ocasek
- Tested prod. by Ronnie Kimball
- The Answer prod. by Bobby Schayer, Brett Gurewitz, Greg Graffin, Greg Hetson & Jay Bentley
- The Biggest Killer in American History prod. by Alex Perialas & Ronnie Kimball
- The Defense prod. by Brett Gurewitz & Greg Graffin
- The Devil in Stitches prod. by Joe Barresi
- The Dodo prod. by Alex Perialas & Ronnie Kimball